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Benthic animal indicators were consistent with the levels of oxygen depletion, chlorophyll- <br /> a and organic enrichment, including macroalgal accumulation, within all of the sub-embayments <br /> of the Waquoit Bay System. The System is presently supporting benthic habitat ranging from <br /> minimally/moderately impaired to significantly impaired. It should be noted that, given the loss <br /> of eelgrass beds, throughout the main basin of Waquoit Bay, eastern and lower Eel Pond <br /> (fringing beds in Childs River), as well as the Quashnet River, Hamblin Pond/Little River and <br /> Jehu Pond/Great River, it is clear that the Waquoit Bay Embayment System is clearly impaired <br /> by nutrient overloading throughout its tidal reaches. Based upon the infaunal community survey <br /> it appears that most of the Waquoit Bay Embayment System is presently supporting impaired <br /> benthic animal habitat, primarily resulting from nitrogen and organic enrichment, periodic <br /> oxygen stress and in some areas, accumulations of drift macroalgae that "smother" benthic <br /> animals. At present, high quality benthic habitat is only found within the lower basin of Eel Pond <br /> and the Seapit River. These areas do not have significant accumulations of macroalgae or <br /> oxygen depletion and have relatively oxidized sediments comprised of medium to fine sands <br /> with low organic enrichment or consolidated muds. <br /> Overall, the pattern of infaunal habitat quality throughout the Waquoit Bay Embayment <br /> System is consistent with measured dissolved oxygen concentrations, chlorophyll, nutrients and <br /> organic matter enrichment in this system. Classification of habitat quality necessarily includes <br /> the structure of the specific estuarine basin, specifically as to whether a basin area is wetland <br /> influenced or an open water tidal embayment. Based upon this analysis it is clear that most of <br /> the benthic animal habitat within the Waquoit Bay Embayment System is moderately to <br /> significantly impaired (Quashnet River, severely degraded) by nitrogen and organic matter <br /> enrichment, while the moderate to high quality benthic animal habitat is primarily found in the <br /> region of the Seapit River down to the Eel Pond inlet. The proximate cause of impairment is <br /> organic matter enrichment and oxygen depletion, stemming ultimately from nitrogen enrichment. <br /> Total nitrogen levels within the significantly impaired basins presently range from 0,65 to 1.20 <br /> mg TN L-', levels typical of other estuarine basins with significant impairment of benthic animal <br /> habitat throughout southeastern Massachusetts estuaries. <br /> 3. Conclusions of the Analysis <br /> The threshold nitrogen level for an embayment represents the average water column <br /> concentration of nitrogen that will support the habitat quality being sought. The water column <br /> nitrogen level is ultimately controlled by the integration of the watershed nitrogen load, the <br /> nitrogen concentration in the inflowing tidal waters (boundary condition) and dilution and <br /> flushing via tidal flows. The water column nitrogen concentration is modified by the extent of <br /> sediment regeneration and by direct atmospheric deposition. <br /> Threshold nitrogen levels for this embayment system were developed to restore or <br /> maintain SA waters or high habitat quality. In this system, high habitat quality was defined as <br /> supportive of eelgrass and supportive of diverse benthic animal communities. Dissolved oxygen <br /> and chlorophyll-a were also considered in the assessment. <br /> Watershed nitrogen loads (Tables ES-1 and ES-2) for the Town of Falmouth and <br /> Mashpee Waquoit Bay embayment system was comprised primarily of wastewater nitrogen. <br /> Land-use and wastewater analysis found that generally about 60% - 85% of the controllable <br /> watershed nitrogen load to the embayment was from wastewater. <br /> A major finding of the MEP clearly indicates that a single total nitrogen threshold can not <br /> be applied to Massachusetts' estuaries, based upon the results of the Great, Green and <br /> Executive Summary 8 <br />